UnifiedOntologyResult
UnifiedOntologyResult(
ontology,
main_nodes,
outlier_nodes,
excluded_nodes,
bridge_edges,
main_threshold,
outlier_threshold,
)Result of building a unified ontology from embedding space.
The unified ontology combines: 1. Main ontology (high similarity threshold) for dense regions 2. Outlier ontology (lower threshold) for sparse regions 3. Bridge edges connecting the two
Attributes
| Name | Type | Description |
|---|---|---|
| ontology | DAGTaxonomy | The unified DAGTaxonomy |
| main_nodes | np.ndarray | Indices of nodes from main ontology |
| outlier_nodes | np.ndarray | Indices of nodes from outlier ontology |
| excluded_nodes | np.ndarray | Indices of double outliers (excluded) |
| bridge_edges | int | Number of edges connecting main and outlier components |
| main_threshold | float | Similarity threshold used for main ontology |
| outlier_threshold | float | Similarity threshold used for outlier ontology |
Methods
| Name | Description |
|---|---|
| summary | Return summary statistics. |
summary
UnifiedOntologyResult.summary()Return summary statistics.